dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01462
Location and strand information: 541 - 2313 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01463
Location and strand information: 2306 - 3856 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01464
Location and strand information: 3938 - 5176 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01465
Location and strand information: 5237 - 6118 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01466
Location and strand information: 6124 - 6948 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01467
Location and strand information: 6975 - 8567 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01468
Location and strand information: 8827 - 10965 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01469
Location and strand information: 10981 - 12888 (+)
Family: GH43_11|GH43
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.6899
Protein molecular weight: 71822.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01470
Location and strand information: 13069 - 14367 (+)
Family: 3.A.1.1.24
Protein type: TC
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01471
Location and strand information: 14456 - 15343 (+)
Family: 3.A.1.1.28
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01472
Location and strand information: 15343 - 16182 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01473
Location and strand information: 16244 - 18088 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01474
Location and strand information: 18066 - 19511 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001988_12|CGC1
Gene ID: MGYG000001988_01475
Location and strand information: 19554 - 20708 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated glucuronyl hydrolase
Protein isoelectric point: 5.036
Protein molecular weight: 44215.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001988_01462	hypothetical protein	TC	541	2313	+	8.A.59.2.1
MGYG000001988_01463	Chemotaxis response regulator protein-glutamate methylesterase	TF	2306	3856	+	HTH_AraC+HTH_AraC
MGYG000001988_01464	hypothetical protein	STP	3938	5176	+	SBP_bac_1
MGYG000001988_01465	Lactose transport system permease protein LacF	TC	5237	6118	+	3.A.1.1.7
MGYG000001988_01466	L-arabinose transport system permease protein AraQ	TC	6124	6948	+	3.A.1.1.45
MGYG000001988_01467	hypothetical protein	null	6975	8567	+	No domain
MGYG000001988_01468	hypothetical protein	null	8827	10965	+	No domain
MGYG000001988_01469	Beta-xylosidase	CAZyme	10981	12888	+	GH43_11\| GH43
MGYG000001988_01470	Multiple sugar-binding protein	TC	13069	14367	+	3.A.1.1.24
MGYG000001988_01471	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	14456	15343	+	3.A.1.1.28
MGYG000001988_01472	L-arabinose transport system permease protein AraQ	TC	15343	16182	+	3.A.1.1.45
MGYG000001988_01473	hypothetical protein	TC	16244	18088	+	8.A.59.2.1
MGYG000001988_01474	Chemotaxis response regulator protein-glutamate methylesterase	TF	18066	19511	+	HTH_AraC+HTH_AraC
MGYG000001988_01475	Unsaturated glucuronyl hydrolase	CAZyme	19554	20708	+	GH88
Protein ID	Protein Name	Type	Start	End	Strand	Signature